PubMed FAQs

  1. How do I Get Started?
  2. Do I need special training to search PubMed?
  3. I'm not finding what I want. Is there a better way to search?
  4. I need some articles on a particular subject.
  5. I need some articles by a particular author.
  6. I need some articles about a particular person.
  7. What is the MeSH Database?
  8. Are there other ways to focus my search?
  9. I need to find a systematic review. It's not listed as a publication type.
  10. There's something wrong with a citation I got from a friend (or from a bibliography, or other non-PubMed source). Can PubMed help me find the article?
  11. Can I save My Search?
  12. Can I save My Search Results?
  13. Can I select just a few of the articles I found or do I have to take them all?
  14. I emailed the references to myself but I only received the first 20 of those I selected. How can I email all of them?
  15. How do I get the complete journal article?
  16. I can't get into an online journal article.
  17. How do I cite an article found in PubMed?


  1. How do I Get Started?

    First think about your question. Be as specific as possible. Identify a problem (eg. obesity or myocardial infarction). Next identify the intervention used to treat or prevent the problem (eg. diet, exercise, a specific drug or type of drug). Are you interested in comparing the effectiveness of 2 or more possible interventions (appetite depressants vs exercise)? What is the outcome you are looking for (weight loss or increased longevity)?

    If combining all these concepts retrieves too few articles, try your search again using only those that are most important.



  2. Do I need special training to search PubMed?

    Not necessarily. You can do a search by just typing your search in natural language,
    Eg. “Does losing weight prevent heart disease"?
    PubMed will follow a pre-programmed set of instructions to interpret your question. If you click on the “details" button you will see the actual search that was run.

    Look through the search results. If you find a good article and would like additional similar articles, click on the “Find Related" button on the right side of the screen.



  3. I'm not finding what I want. Is there a better way to search?

    Use the Full Power of PubMed: A searcher can more precisely determine his search results by selecting the appropriate search techniques himself rather than by relying on the PubMed search system to do it for him. PubMed can be searched using MeSH database, author names, title words, text words or phrases, journal names, or any combination of these. Detailed instructions and tutorials can be found in PubMed “Help" in the blue frame on the left of the search screen.

    To take full advantage of PubMed’s functionality you may want to make an appointment for a research consultation with your medical librarian. At Brown, email Frank Kellerman or Janet Crager or call 863-1532.



  4. I need some articles on a particular subject.

    Use one or more of the following techniques:
    • Search using natural language but be sure to click on the “Details" button to see how PubMed interpreted your search.
    • Select search terms from the MeSH Database
    • Use Boolean operators AND, OR and NOT to combine any number of search terms. You can also include previous searches by simply referring to each by its statement number. Click on the "History" tab to view numbered search statements.
    • You may have to evaluate your results and reformulate your search several times before finding the best articles.
    • For instructions and search tips, see PubMed and MeSH tutorials and the PubMed Basics flyer.



  5. I need some articles by a particular author.

    Example: Pauling L [au]
    1. First type author's last name, space, first initial.
    2. Then follow the name with "[au]" or Click limit / scroll down to “Tag Terms"/ open the “Default Tag" drop down menu / click "author"




  6. I need some articles about a particular person.

    Type in person's last name followed by [PS] (stands for personal name as subject).



  7. What is the MeSH Database?

    The MeSH, Medical Subject Headings, Database. "The MeSH controlled vocabulary is a distinctive feature of MEDLINE. It imposes uniformity and consistency to the indexing of biomedical literature."

    To select MeSH search terms, use the MeSH database found in the blue frame on the left of the search screen.

    The MeSH Database provides:
    • A searchable list of the vocabulary used for indexing PubMed articles
    • A definition for most terms
    • Suggestions of older terms to use for searching earlier years of PubMed
    • Suggestions of related MeSH terms
    • The "MeSH Tree Structures", a conceptual grouping of terms which enables the searcher to easily find broader or more specific terms. Choose the most specific term you can find. PubMed automatically searches not only any term you select but also searches all the terms found indented under it in the Tree. You may cancel out this function by clicking on the box next to the phrase “Do Not Explode This Term" in the middle of the screen.

    "Restrict Search to Major Topics" , an option which allows further focusing of a search by ensuring that the selected term will be a high priority topic of any article retrieved.

    As you select your terms using the MeSH thesaurus, you will also be able to select subheadings to make your search more specific.

    Once the selections have been made, use the “Send To’ drop-down box at the top of the screen to transfer the term to the PubMed search box and into the PubMed database.




  8. Are there other ways to focus my search?

    Among the most popular ways to limit a search is to focus on the type of publication you want- randomized controlled trial, meta-analysis or review, for example. You may also choose the gender or age of your target population or the language of the articles you wish to see. Just click on the Limit button and make your selections.




  9. I need to find a systematic review. It's not listed as a publication type.

    Use the Clinical Queries page (linked in the blue column on the left). Put the selected search statement number into the form under "Find Systematic Reviews"

    An alternative way to do the same thing is to add "AND systematic[sb]" to your search. If you still don’t find what you want call Frank or Janet.




  10. There's something wrong with a citation I got from a friend (or from a bibliography, or other non-PubMed source). Can PubMed help me find the article?
    Try the "Single Citation Matcher" (found in blue column on the left), entering bits of information in various combinations. Remember there is almost always something true in each incorrect citation.
    • How did you find out about this article?
    • Was it hand written? If yes, think about handwriting misinterpretations. A number 1 could look like a 7, a 3 could look like an 8.
    • Was it typed? Look at what's close on the keyboard.
    • Was it heard? A five could sound like 9.




  11. Can I save My Search?

    Use "My NCBI" in blue column on left side of the PubMed screen. First register in NCBI. Then use the “Save Search" button that will appear to the right of the PubMed search box.




  12. Can I save My Search Results?

    References are saved online for 8 hours after activity stops. To save permanently, first save articles onto the Clipboard and then to My NCBI Collections. You can also use the "send to" drop down box:
    • To email results – select "email" in the drop down box, then complete the form and send
    • To print a list – select "text" in the drop down box, then use your browser ( Netscape, Internet Explorer, etc.) to print
    • To download into EndNote or RefWorks (bibliographic managers), display references in MEDLINE format, then send to text, then save as .txt file. At this point, follow your bibliographic manager’s instructions for importing the file.




  13. Can I select just a few of the articles I found or do I have to take them all?

    You can tailor a list of selected references in the following way:
    • As you review the results of each search, select references by clicking in the small box to the left.
    • Open the “Send to" dropdown menu. Click “Clipboard". All of your selected articles will be stored there for up to 8 hours until you are ready to print, email them, download them to your desktop or transfer the to My NCBI Collections.




  14. I emailed the references to myself but I only received the first 20 of those I selected. How can I email all of them?

    PubMed emails only the references displayed on the screen. The default is 20 references per page but you can change that by first clicking on the dropdown menu to the right of the word “Show" on the PubMed search page and then choosing as many as 500 references to be displayed in one long list. As long as the number you choose is higher than the number of references you wish to email, you will receive all the references you selected.

    This is also true for sending your references to "Text" for the purposes of either printing them or exporting them to a bibliographic manager such as EndNote or RefWorks.



  15. How do I get the complete journal article?

    Display the selected reference in Abstract format. At least one, and perhaps 2 icons will appear under the title of the article. If the icon to the left indicates the journal is available free, go ahead and click on it. Otherwise, click on the icon to the right, labeled SFX@brown. (soon to change to FindIt). A new screen will open, leading you to the online article if available. If not, try the next option -search JOSIAH, the Brown catalog, to see if the Library has a print copy. If the article is still unavailable, order it through interlibrary loan, ILLiad.




  16. I can't get into an online journal article.

    Troubleshoot the problem by following these steps:
    1. Which icon did you click on?
      • If the left, try the icon on the right, the SFX icon.
      • If you already clicked on the SFX icon, go to the next step.
    2. Check JOSIAH for Library holdings. Does Brown own the year you need?
      • If no, order the article through interlibrary loan.
      • If yes, go to the next step.
    3. Are you off campus?
      • If no, first, wait 15 minutes and try again. There may be a limit on number of concurrent users. If it still doesn’t work, report the malfunction to the Library at 863-3333.
      • If yes, then go to the next step.
    4. Are you using the proxy server?
      • If no, are you using the VPN? You need to use either the VPN or proxy from off-campus. But please note, the VPN may not work from computers that have another VPN already installed as, for example, in Lifespan hospitals.
      • If yes, then go to the next step.
    5. Does the word "proxy" appear in the URL on your current web page?
      • If yes, follow instructions in the first bullet under step c.
      • If no, then
        1. Use the back button until "proxy" appears in the URL
        2. Right click on the next link using the right mouse. From resulting drop down menu, use left mouse to select “Open Link in New Window".
        3. If it still doesn’t work, contact Frank or Janet at 863-1532 or Anne Nolan at 863-3577.



  17. How do I cite an article found in PubMed, as though it were a journal or as a web site?

    Cite an article from PubMed just as you would cite any journal article.

    Librarian Frank Kellerman gives regularly scheduled EndNote and RefWorks workshops. For descriptions of the classes and links for registration go to http://comped.brown.edu/ and click on “Undergrads," “Grads," “Staff" or “Faculty".

    You can also see Frank any time for individual training.